Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf72Q96LT7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf72Q96LT7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
C9orf72Q96LT7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
C9orf72Q96LT7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
C9orf72Q96LT7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf72Q96LT7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
C9orf72Q96LT7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
C9orf72Q96LT7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 LINC01568-207ENST00000641790 1380 ntBASIC18.71■□□□□ 0.59
C9orf72Q96LT7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 MIR564-202ENST00000385049 94 ntBASIC18.71■□□□□ 0.59
C9orf72Q96LT7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 AC010947.1-201ENST00000623454 693 ntBASIC18.71■□□□□ 0.59
C9orf72Q96LT7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.71■□□□□ 0.59
C9orf72Q96LT7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 AP005242.2-201ENST00000580065 1175 ntBASIC18.7■□□□□ 0.58
C9orf72Q96LT7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.7■□□□□ 0.58
C9orf72Q96LT7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 AL645608.8-201ENST00000606034 2086 ntBASIC18.69■□□□□ 0.58
C9orf72Q96LT7 KRT8P50-201ENST00000562022 1438 ntBASIC18.69■□□□□ 0.58
C9orf72Q96LT7 AL023284.2-201ENST00000405850 579 ntBASIC18.69■□□□□ 0.58
C9orf72Q96LT7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 AC005363.2-201ENST00000618631 242 ntBASIC18.69■□□□□ 0.58
C9orf72Q96LT7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.69■□□□□ 0.58
C9orf72Q96LT7 GPAT2P1-201ENST00000444924 1672 ntBASIC18.69■□□□□ 0.58
C9orf72Q96LT7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
C9orf72Q96LT7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.68■□□□□ 0.58
C9orf72Q96LT7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms