Protein–RNA interactions for Protein: Q96L94

SNX22, Sorting nexin-22, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22Q96L94 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.33■□□□□ 0.04
SNX22Q96L94 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
SNX22Q96L94 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.33■□□□□ 0.04
SNX22Q96L94 ATP5G1P1-201ENST00000448724 379 ntBASIC15.33■□□□□ 0.04
SNX22Q96L94 SEC1P-202ENST00000473944 940 ntBASIC15.33■□□□□ 0.04
SNX22Q96L94 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.33■□□□□ 0.04
SNX22Q96L94 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.33■□□□□ 0.04
SNX22Q96L94 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.33■□□□□ 0.04
SNX22Q96L94 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.33■□□□□ 0.04
SNX22Q96L94 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 AC097493.4-201ENST00000641197 219 ntBASIC15.33■□□□□ 0.04
SNX22Q96L94 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
SNX22Q96L94 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SNX22Q96L94 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.33■□□□□ 0.04
SNX22Q96L94 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SNX22Q96L94 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.33■□□□□ 0.04
SNX22Q96L94 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNX22Q96L94 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
SNX22Q96L94 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX22Q96L94 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX22Q96L94 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX22Q96L94 AC012306.2-201ENST00000609350 630 ntBASIC15.32■□□□□ 0.04
SNX22Q96L94 AC005363.2-201ENST00000618631 242 ntBASIC15.32■□□□□ 0.04
SNX22Q96L94 AL138966.2-201ENST00000621997 464 ntBASIC15.32■□□□□ 0.04
SNX22Q96L94 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SNX22Q96L94 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX22Q96L94 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 AC135776.1-201ENST00000319817 2481 ntBASIC15.32■□□□□ 0.04
SNX22Q96L94 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX22Q96L94 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SNX22Q96L94 AC093677.2-201ENST00000600169 1863 ntBASIC15.31■□□□□ 0.04
SNX22Q96L94 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.31■□□□□ 0.04
SNX22Q96L94 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX22Q96L94 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX22Q96L94 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.31■□□□□ 0.04
SNX22Q96L94 AL031432.5-201ENST00000641059 760 ntBASIC15.31■□□□□ 0.04
SNX22Q96L94 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNX22Q96L94 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms