Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RPGRIP1Q96KN7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 AL645929.1-201ENST00000420084 975 ntBASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 SPDYE13P-201ENST00000445314 798 ntBASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPGRIP1Q96KN7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.02■□□□□ 0.79
RPGRIP1Q96KN7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPGRIP1Q96KN7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPGRIP1Q96KN7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPGRIP1Q96KN7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPGRIP1Q96KN7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 KRT17P6-201ENST00000453795 1220 ntBASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 ESPNP-201ENST00000270691 2015 ntBASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPGRIP1Q96KN7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 FAAHP1-202ENST00000446499 1238 ntBASIC20■□□□□ 0.79
RPGRIP1Q96KN7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20■□□□□ 0.79
RPGRIP1Q96KN7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 TSSC2-201ENST00000450217 709 ntBASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
RPGRIP1Q96KN7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms