Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.59□□□□□ -0.07
RITA1Q96K30 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.59□□□□□ -0.07
RITA1Q96K30 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.59□□□□□ -0.07
RITA1Q96K30 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.59□□□□□ -0.07
RITA1Q96K30 AL359075.1-203ENST00000462729 1002 ntBASIC14.59□□□□□ -0.07
RITA1Q96K30 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RITA1Q96K30 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.59□□□□□ -0.07
RITA1Q96K30 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RITA1Q96K30 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RITA1Q96K30 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.59□□□□□ -0.07
RITA1Q96K30 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.59□□□□□ -0.07
RITA1Q96K30 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
RITA1Q96K30 AC132938.6-201ENST00000623828 1655 ntBASIC14.58□□□□□ -0.07
RITA1Q96K30 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RITA1Q96K30 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RITA1Q96K30 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RITA1Q96K30 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RITA1Q96K30 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
RITA1Q96K30 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
RITA1Q96K30 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
RITA1Q96K30 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RITA1Q96K30 TMPOP1-202ENST00000424642 1267 ntBASIC14.58□□□□□ -0.08
RITA1Q96K30 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.58□□□□□ -0.08
RITA1Q96K30 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.58□□□□□ -0.08
RITA1Q96K30 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.58□□□□□ -0.08
RITA1Q96K30 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.58□□□□□ -0.08
RITA1Q96K30 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
RITA1Q96K30 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RITA1Q96K30 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
RITA1Q96K30 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RITA1Q96K30 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.57□□□□□ -0.08
RITA1Q96K30 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
RITA1Q96K30 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.57□□□□□ -0.08
RITA1Q96K30 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 AL136038.4-201ENST00000603606 1261 ntBASIC14.57□□□□□ -0.08
RITA1Q96K30 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.57□□□□□ -0.08
RITA1Q96K30 HYMAI.1-201ENST00000620949 238 ntBASIC14.57□□□□□ -0.08
RITA1Q96K30 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RITA1Q96K30 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RITA1Q96K30 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
RITA1Q96K30 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.57□□□□□ -0.08
RITA1Q96K30 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RITA1Q96K30 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RITA1Q96K30 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RITA1Q96K30 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RITA1Q96K30 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RITA1Q96K30 LINC00602-201ENST00000629776 2065 ntBASIC14.56□□□□□ -0.08
RITA1Q96K30 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RITA1Q96K30 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RITA1Q96K30 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RITA1Q96K30 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RITA1Q96K30 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RITA1Q96K30 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RITA1Q96K30 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RITA1Q96K30 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RITA1Q96K30 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms