Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ITCHQ96J02 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ITCHQ96J02 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ITCHQ96J02 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ITCHQ96J02 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ITCHQ96J02 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 KRT18P23-201ENST00000435622 1283 ntBASIC17.31■□□□□ 0.36
ITCHQ96J02 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.31■□□□□ 0.36
ITCHQ96J02 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.31■□□□□ 0.36
ITCHQ96J02 AC009065.1-201ENST00000564055 1225 ntBASIC17.31■□□□□ 0.36
ITCHQ96J02 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.31■□□□□ 0.36
ITCHQ96J02 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.31■□□□□ 0.36
ITCHQ96J02 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.31■□□□□ 0.36
ITCHQ96J02 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 AC093010.1-201ENST00000473625 1624 ntBASIC17.31■□□□□ 0.36
ITCHQ96J02 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.31■□□□□ 0.36
ITCHQ96J02 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ITCHQ96J02 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ITCHQ96J02 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.31■□□□□ 0.36
ITCHQ96J02 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.3■□□□□ 0.36
ITCHQ96J02 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ITCHQ96J02 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ITCHQ96J02 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.3■□□□□ 0.36
ITCHQ96J02 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ITCHQ96J02 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 ABHD17AP1-201ENST00000358206 933 ntBASIC17.3■□□□□ 0.36
ITCHQ96J02 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.3■□□□□ 0.36
ITCHQ96J02 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ITCHQ96J02 RPS2P55-201ENST00000397318 883 ntBASIC17.3■□□□□ 0.36
ITCHQ96J02 AC107956.1-201ENST00000494359 873 ntBASIC17.3■□□□□ 0.36
ITCHQ96J02 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ITCHQ96J02 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ITCHQ96J02 KRT18P55-202ENST00000578578 1546 ntBASIC17.3■□□□□ 0.36
ITCHQ96J02 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ITCHQ96J02 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ITCHQ96J02 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ITCHQ96J02 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.29■□□□□ 0.36
ITCHQ96J02 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ITCHQ96J02 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.29■□□□□ 0.36
ITCHQ96J02 AC006116.8-202ENST00000587620 1550 ntBASIC17.29■□□□□ 0.36
ITCHQ96J02 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.29■□□□□ 0.36
ITCHQ96J02 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.29■□□□□ 0.36
ITCHQ96J02 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.29■□□□□ 0.36
ITCHQ96J02 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.29■□□□□ 0.36
ITCHQ96J02 REXO1L10P-201ENST00000615707 1290 ntBASIC17.29■□□□□ 0.36
ITCHQ96J02 REXO1L12P-201ENST00000622156 912 ntBASIC17.29■□□□□ 0.36
ITCHQ96J02 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 AC012317.2-201ENST00000623305 2251 ntBASIC17.29■□□□□ 0.36
ITCHQ96J02 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ITCHQ96J02 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
ITCHQ96J02 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.29■□□□□ 0.36
ITCHQ96J02 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.29■□□□□ 0.36
ITCHQ96J02 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.28■□□□□ 0.36
ITCHQ96J02 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITCHQ96J02 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITCHQ96J02 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ITCHQ96J02 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITCHQ96J02 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITCHQ96J02 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.28■□□□□ 0.36
ITCHQ96J02 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ITCHQ96J02 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITCHQ96J02 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ITCHQ96J02 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ITCHQ96J02 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.28■□□□□ 0.36
ITCHQ96J02 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ITCHQ96J02 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.28■□□□□ 0.36
ITCHQ96J02 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITCHQ96J02 AL355355.2-201ENST00000442321 338 ntBASIC17.28■□□□□ 0.36
ITCHQ96J02 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms