Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX11Q96FC9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX11Q96FC9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX11Q96FC9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX11Q96FC9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX11Q96FC9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX11Q96FC9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 AC092597.1-201ENST00000487352 616 ntBASIC21.56■■□□□ 1.04
DDX11Q96FC9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX11Q96FC9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX11Q96FC9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX11Q96FC9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 SPDYE13P-201ENST00000445314 798 ntBASIC21.55■■□□□ 1.04
DDX11Q96FC9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 CLEC4GP1-201ENST00000596555 870 ntBASIC21.55■■□□□ 1.04
DDX11Q96FC9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX11Q96FC9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
DDX11Q96FC9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 AL645929.1-201ENST00000420084 975 ntBASIC21.54■■□□□ 1.04
DDX11Q96FC9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 AL450487.1-201ENST00000426799 995 ntBASIC21.54■■□□□ 1.04
DDX11Q96FC9 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.54■■□□□ 1.04
DDX11Q96FC9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX11Q96FC9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX11Q96FC9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX11Q96FC9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
DDX11Q96FC9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX11Q96FC9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX11Q96FC9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX11Q96FC9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX11Q96FC9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX11Q96FC9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
DDX11Q96FC9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX11Q96FC9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.53■■□□□ 1.04
DDX11Q96FC9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX11Q96FC9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX11Q96FC9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX11Q96FC9 AC093677.2-201ENST00000600169 1863 ntBASIC21.53■■□□□ 1.04
DDX11Q96FC9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX11Q96FC9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX11Q96FC9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms