Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 AC026396.1-201ENST00000419388 421 ntBASIC23.3■■□□□ 1.32
ZNF428Q96B54 AL845331.1-201ENST00000424978 1190 ntBASIC23.3■■□□□ 1.32
ZNF428Q96B54 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 LINC00265-3P-201ENST00000447588 903 ntBASIC23.3■■□□□ 1.32
ZNF428Q96B54 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 REXO1L9P-201ENST00000604264 2108 ntBASIC23.3■■□□□ 1.32
ZNF428Q96B54 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZNF428Q96B54 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.3■■□□□ 1.32
ZNF428Q96B54 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 AC246785.2-201ENST00000432512 513 ntBASIC23.29■■□□□ 1.32
ZNF428Q96B54 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 AP003733.1-201ENST00000491725 852 ntBASIC23.29■■□□□ 1.32
ZNF428Q96B54 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ZNF428Q96B54 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 NOC2LP1-202ENST00000452600 2235 ntBASIC23.29■■□□□ 1.32
ZNF428Q96B54 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
ZNF428Q96B54 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 KRT18P65-201ENST00000439811 1286 ntBASIC23.28■■□□□ 1.32
ZNF428Q96B54 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC23.28■■□□□ 1.32
ZNF428Q96B54 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZNF428Q96B54 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZNF428Q96B54 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.27■■□□□ 1.32
ZNF428Q96B54 CHCHD2P8-201ENST00000429873 447 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms