Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 CRYGEP-201ENST00000412192 528 ntBASIC18.04■□□□□ 0.48
CLDN23Q96B33 SPDYE21P-201ENST00000413323 827 ntBASIC18.04■□□□□ 0.48
CLDN23Q96B33 AC096633.1-201ENST00000422446 749 ntBASIC18.04■□□□□ 0.48
CLDN23Q96B33 CNN2P11-201ENST00000429351 262 ntBASIC18.04■□□□□ 0.48
CLDN23Q96B33 MKNK2P1-201ENST00000437526 628 ntBASIC18.04■□□□□ 0.48
CLDN23Q96B33 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLDN23Q96B33 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLDN23Q96B33 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 AP002472.1-201ENST00000577490 586 ntBASIC18.03■□□□□ 0.48
CLDN23Q96B33 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 AC092364.2-202ENST00000597012 1073 ntBASIC18.03■□□□□ 0.48
CLDN23Q96B33 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLDN23Q96B33 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.03■□□□□ 0.48
CLDN23Q96B33 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 AC004817.3-201ENST00000602957 2129 ntBASIC18.02■□□□□ 0.48
CLDN23Q96B33 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN23Q96B33 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN23Q96B33 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN23Q96B33 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN23Q96B33 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 FAM8A3P-201ENST00000427218 844 ntBASIC18.02■□□□□ 0.48
CLDN23Q96B33 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN23Q96B33 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.02■□□□□ 0.48
CLDN23Q96B33 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLDN23Q96B33 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN23Q96B33 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.02■□□□□ 0.47
CLDN23Q96B33 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN23Q96B33 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CLDN23Q96B33 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.02■□□□□ 0.47
CLDN23Q96B33 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
CLDN23Q96B33 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms