Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.63■□□□□ 0.25
HPS1Q92902 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.63■□□□□ 0.25
HPS1Q92902 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.63■□□□□ 0.25
HPS1Q92902 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS1Q92902 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
HPS1Q92902 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.63■□□□□ 0.25
HPS1Q92902 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS1Q92902 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.63■□□□□ 0.25
HPS1Q92902 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HPS1Q92902 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS1Q92902 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.62■□□□□ 0.25
HPS1Q92902 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HPS1Q92902 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HPS1Q92902 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HPS1Q92902 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HPS1Q92902 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.62■□□□□ 0.25
HPS1Q92902 YBX1P10-201ENST00000444752 975 ntBASIC16.62■□□□□ 0.25
HPS1Q92902 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.62■□□□□ 0.25
HPS1Q92902 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.62■□□□□ 0.25
HPS1Q92902 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 AF186192.3-201ENST00000583427 947 ntBASIC16.62■□□□□ 0.25
HPS1Q92902 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS1Q92902 AL589935.2-201ENST00000616471 1231 ntBASIC16.62■□□□□ 0.25
HPS1Q92902 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
HPS1Q92902 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.62■□□□□ 0.25
HPS1Q92902 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HPS1Q92902 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HPS1Q92902 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HPS1Q92902 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS1Q92902 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HPS1Q92902 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HPS1Q92902 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HPS1Q92902 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS1Q92902 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HPS1Q92902 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HPS1Q92902 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HPS1Q92902 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.61■□□□□ 0.25
HPS1Q92902 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS1Q92902 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.61■□□□□ 0.25
HPS1Q92902 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.61■□□□□ 0.25
HPS1Q92902 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 AC026471.5-201ENST00000615068 467 ntBASIC16.61■□□□□ 0.25
HPS1Q92902 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.61■□□□□ 0.25
HPS1Q92902 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS1Q92902 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.61■□□□□ 0.25
HPS1Q92902 HTR7P1-201ENST00000538670 1336 ntBASIC16.61■□□□□ 0.25
HPS1Q92902 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HPS1Q92902 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
HPS1Q92902 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HPS1Q92902 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms