Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 BICD1-207ENST00000551848 1962 ntBASIC19.06■□□□□ 0.64
RNF139Q8WU17 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 TSPY22P-201ENST00000427496 604 ntBASIC19.06■□□□□ 0.64
RNF139Q8WU17 BX276092.5-203ENST00000456199 560 ntBASIC19.06■□□□□ 0.64
RNF139Q8WU17 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 RNF126P1-202ENST00000569893 925 ntBASIC19.06■□□□□ 0.64
RNF139Q8WU17 AC005332.3-201ENST00000589904 676 ntBASIC19.06■□□□□ 0.64
RNF139Q8WU17 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 AC069148.1-201ENST00000608741 768 ntBASIC19.06■□□□□ 0.64
RNF139Q8WU17 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 Z83836.1-201ENST00000624605 1642 ntBASIC19.06■□□□□ 0.64
RNF139Q8WU17 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.06■□□□□ 0.64
RNF139Q8WU17 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RNF139Q8WU17 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 AL024508.2-201ENST00000607749 1894 ntBASIC19.05■□□□□ 0.64
RNF139Q8WU17 AC135050.7-201ENST00000624508 2218 ntBASIC19.05■□□□□ 0.64
RNF139Q8WU17 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 GPR32P1-201ENST00000601788 811 ntBASIC19.05■□□□□ 0.64
RNF139Q8WU17 AL121672.3-201ENST00000608644 468 ntBASIC19.05■□□□□ 0.64
RNF139Q8WU17 AC093458.2-201ENST00000623150 629 ntBASIC19.05■□□□□ 0.64
RNF139Q8WU17 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.05■□□□□ 0.64
RNF139Q8WU17 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RNF139Q8WU17 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 IGHGP-201ENST00000390555 1178 ntBASIC19.04■□□□□ 0.64
RNF139Q8WU17 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 KRT8P26-201ENST00000534154 1276 ntBASIC19.04■□□□□ 0.64
RNF139Q8WU17 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RNF139Q8WU17 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.04■□□□□ 0.64
RNF139Q8WU17 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF139Q8WU17 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF139Q8WU17 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms