Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 AC111152.3-201ENST00000569699 673 ntBASIC25.24■■□□□ 1.63
TMC1Q8TDI8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 AC138894.3-201ENST00000603787 634 ntBASIC25.24■■□□□ 1.63
TMC1Q8TDI8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TMC1Q8TDI8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 TSPY19P-201ENST00000418461 509 ntBASIC25.23■■□□□ 1.63
TMC1Q8TDI8 TSPY18P-201ENST00000441642 509 ntBASIC25.23■■□□□ 1.63
TMC1Q8TDI8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 IFNL4P1-201ENST00000607083 540 ntBASIC25.23■■□□□ 1.63
TMC1Q8TDI8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TMC1Q8TDI8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 KRT17P6-201ENST00000453795 1220 ntBASIC25.22■■□□□ 1.63
TMC1Q8TDI8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 AP005901.3-202ENST00000581653 237 ntBASIC25.22■■□□□ 1.63
TMC1Q8TDI8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 Z69720.1-201ENST00000601483 472 ntBASIC25.22■■□□□ 1.63
TMC1Q8TDI8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC25.22■■□□□ 1.63
TMC1Q8TDI8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 AL024508.2-201ENST00000607749 1894 ntBASIC25.21■■□□□ 1.63
TMC1Q8TDI8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 AC091304.2-201ENST00000564639 760 ntBASIC25.21■■□□□ 1.63
TMC1Q8TDI8 AC099336.1-202ENST00000602961 463 ntBASIC25.21■■□□□ 1.63
TMC1Q8TDI8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC25.21■■□□□ 1.63
TMC1Q8TDI8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
TMC1Q8TDI8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
TMC1Q8TDI8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC25.2■■□□□ 1.63
TMC1Q8TDI8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 AL121772.3-201ENST00000610840 674 ntBASIC25.2■■□□□ 1.62
TMC1Q8TDI8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
TMC1Q8TDI8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms