Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 AL160286.2-201ENST00000567150 934 ntBASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 KRT18P55-202ENST00000578578 1546 ntBASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SMIM11BQ8TCY0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 OR10C1-204ENST00000622521 1039 ntBASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 AC006557.6-201ENST00000623071 864 ntBASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 CROCCP2-202ENST00000412962 2773 ntBASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 AC105020.1-201ENST00000435356 2205 ntBASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
SMIM11BQ8TCY0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SMIM11BQ8TCY0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms