Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 AC022616.7-201ENST00000525383 220 ntBASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH19Q8TAB3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 AL391807.1-203ENST00000604392 2365 ntBASIC18.74■□□□□ 0.59
PCDH19Q8TAB3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 STARP1-201ENST00000397973 869 ntBASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 LINC00167-201ENST00000530583 1419 ntBASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDH19Q8TAB3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDH19Q8TAB3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms