Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 INGX-201ENST00000359239 846 ntBASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 CA15P1-201ENST00000481698 905 ntBASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 AC116562.4-202ENST00000641738 218 ntBASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFAP61Q8NHU2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 RCC2P3-201ENST00000418112 1537 ntBASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 SLC25A1P2-201ENST00000430693 912 ntBASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 AC073912.3-201ENST00000624414 853 ntBASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 AC133561.5-201ENST00000635547 218 ntBASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 LINC01568-207ENST00000641790 1380 ntBASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFAP61Q8NHU2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP61Q8NHU2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.39■□□□□ 0.54
CFAP61Q8NHU2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP61Q8NHU2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CFAP61Q8NHU2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CFAP61Q8NHU2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 TSPY17P-201ENST00000450329 467 ntBASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 AP003041.3-201ENST00000527151 707 ntBASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 AL023803.3-201ENST00000615559 522 ntBASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.39■□□□□ 0.53
CFAP61Q8NHU2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 GPAT2P1-201ENST00000444924 1672 ntBASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFAP61Q8NHU2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms