Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KDM1BQ8NB78 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDM1BQ8NB78 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
KDM1BQ8NB78 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KDM1BQ8NB78 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
KDM1BQ8NB78 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 TOB2P1-201ENST00000469761 992 ntBASIC18.53■□□□□ 0.56
KDM1BQ8NB78 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 AL592071.1-201ENST00000611956 408 ntBASIC18.53■□□□□ 0.56
KDM1BQ8NB78 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
KDM1BQ8NB78 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 LINC00265-3P-201ENST00000447588 903 ntBASIC18.52■□□□□ 0.56
KDM1BQ8NB78 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 AL353801.3-201ENST00000609898 542 ntBASIC18.52■□□□□ 0.56
KDM1BQ8NB78 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KDM1BQ8NB78 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.52■□□□□ 0.55
KDM1BQ8NB78 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.52■□□□□ 0.55
KDM1BQ8NB78 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
KDM1BQ8NB78 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 TPM4P1-201ENST00000436100 807 ntBASIC18.51■□□□□ 0.55
KDM1BQ8NB78 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 Z69720.1-201ENST00000601483 472 ntBASIC18.51■□□□□ 0.55
KDM1BQ8NB78 AC004263.2-201ENST00000617183 678 ntBASIC18.51■□□□□ 0.55
KDM1BQ8NB78 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 AC233702.3-201ENST00000578656 1387 ntBASIC18.51■□□□□ 0.55
KDM1BQ8NB78 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 NOC2LP2-201ENST00000407594 1944 ntBASIC18.51■□□□□ 0.55
KDM1BQ8NB78 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KDM1BQ8NB78 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.5■□□□□ 0.55
KDM1BQ8NB78 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms