Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 IGHGP-201ENST00000390555 1178 ntBASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 TSPY22P-201ENST00000427496 604 ntBASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 GPR32P1-201ENST00000601788 811 ntBASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 AL390719.2-201ENST00000606993 987 ntBASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH20Q8N6Y1 AC090340.1-201ENST00000620778 4980 ntBASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 TSSC2-201ENST00000450217 709 ntBASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 AC016734.2-201ENST00000624325 1377 ntBASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH20Q8N6Y1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 HCG11-201ENST00000411553 5696 ntBASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 ATP5G2P1-201ENST00000433580 426 ntBASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDH20Q8N6Y1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PCDH20Q8N6Y1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDH20Q8N6Y1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDH20Q8N6Y1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PCDH20Q8N6Y1 AL024508.2-201ENST00000607749 1894 ntBASIC18.52■□□□□ 0.55
PCDH20Q8N6Y1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH20Q8N6Y1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH20Q8N6Y1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDH20Q8N6Y1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 CHCHD2P8-201ENST00000429873 447 ntBASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 AC113404.2-201ENST00000507884 177 ntBASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDH20Q8N6Y1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms