Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.96■□□□□ 0.79
NME8Q8N427 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.96■□□□□ 0.79
NME8Q8N427 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.96■□□□□ 0.79
NME8Q8N427 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.96■□□□□ 0.79
NME8Q8N427 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NME8Q8N427 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NME8Q8N427 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.96■□□□□ 0.79
NME8Q8N427 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.96■□□□□ 0.79
NME8Q8N427 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NME8Q8N427 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NME8Q8N427 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NME8Q8N427 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NME8Q8N427 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NME8Q8N427 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NME8Q8N427 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.95■□□□□ 0.78
NME8Q8N427 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.95■□□□□ 0.78
NME8Q8N427 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 LINC01126-201ENST00000623515 1646 ntBASIC19.95■□□□□ 0.78
NME8Q8N427 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NME8Q8N427 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.95■□□□□ 0.78
NME8Q8N427 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
NME8Q8N427 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.95■□□□□ 0.78
NME8Q8N427 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.95■□□□□ 0.78
NME8Q8N427 AF238378.1-201ENST00000526806 358 ntBASIC19.95■□□□□ 0.78
NME8Q8N427 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.95■□□□□ 0.78
NME8Q8N427 AC009533.2-201ENST00000543664 586 ntBASIC19.95■□□□□ 0.78
NME8Q8N427 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.95■□□□□ 0.78
NME8Q8N427 SLC25A6P4-201ENST00000586535 553 ntBASIC19.95■□□□□ 0.78
NME8Q8N427 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.95■□□□□ 0.78
NME8Q8N427 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.95■□□□□ 0.78
NME8Q8N427 AC064862.7-201ENST00000604520 867 ntBASIC19.95■□□□□ 0.78
NME8Q8N427 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.95■□□□□ 0.78
NME8Q8N427 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NME8Q8N427 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NME8Q8N427 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NME8Q8N427 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.94■□□□□ 0.78
NME8Q8N427 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.94■□□□□ 0.78
NME8Q8N427 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NME8Q8N427 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.94■□□□□ 0.78
NME8Q8N427 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.94■□□□□ 0.78
NME8Q8N427 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 KRT18P65-201ENST00000439811 1286 ntBASIC19.94■□□□□ 0.78
NME8Q8N427 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.94■□□□□ 0.78
NME8Q8N427 AC096582.2-201ENST00000510860 516 ntBASIC19.94■□□□□ 0.78
NME8Q8N427 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NME8Q8N427 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
NME8Q8N427 AC005336.2-201ENST00000593183 939 ntBASIC19.94■□□□□ 0.78
NME8Q8N427 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.94■□□□□ 0.78
NME8Q8N427 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NME8Q8N427 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NME8Q8N427 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NME8Q8N427 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NME8Q8N427 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 BX323043.1-201ENST00000641006 1765 ntBASIC19.93■□□□□ 0.78
NME8Q8N427 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.93■□□□□ 0.78
NME8Q8N427 LINC00602-201ENST00000629776 2065 ntBASIC19.93■□□□□ 0.78
NME8Q8N427 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.93■□□□□ 0.78
NME8Q8N427 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NME8Q8N427 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
NME8Q8N427 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.93■□□□□ 0.78
NME8Q8N427 AC099343.3-201ENST00000605834 2503 ntBASIC19.93■□□□□ 0.78
NME8Q8N427 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.93■□□□□ 0.78
NME8Q8N427 AC020763.4-201ENST00000623414 4170 ntBASIC19.93■□□□□ 0.78
NME8Q8N427 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
NME8Q8N427 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NME8Q8N427 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.93■□□□□ 0.78
NME8Q8N427 ANO7L1-203ENST00000602586 1720 ntBASIC19.93■□□□□ 0.78
NME8Q8N427 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NME8Q8N427 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NME8Q8N427 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.92■□□□□ 0.78
NME8Q8N427 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms