Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 POM121L3P-201ENST00000419331 1163 ntBASIC18.47■□□□□ 0.55
CHPFQ8IZ52 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHPFQ8IZ52 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 NEFHP1-201ENST00000412845 2629 ntBASIC18.46■□□□□ 0.55
CHPFQ8IZ52 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 SAPCD2P3-201ENST00000455031 850 ntBASIC18.46■□□□□ 0.55
CHPFQ8IZ52 AC079776.4-201ENST00000511039 504 ntBASIC18.46■□□□□ 0.55
CHPFQ8IZ52 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 AL662844.1-201ENST00000546340 181 ntBASIC18.46■□□□□ 0.55
CHPFQ8IZ52 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.46■□□□□ 0.55
CHPFQ8IZ52 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.46■□□□□ 0.54
CHPFQ8IZ52 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 AKR1C7P-201ENST00000305623 895 ntBASIC18.45■□□□□ 0.54
CHPFQ8IZ52 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.45■□□□□ 0.54
CHPFQ8IZ52 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 AC096582.2-201ENST00000510860 516 ntBASIC18.45■□□□□ 0.54
CHPFQ8IZ52 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.45■□□□□ 0.54
CHPFQ8IZ52 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 REXO1L6P-202ENST00000619970 1078 ntBASIC18.45■□□□□ 0.54
CHPFQ8IZ52 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 AL499627.1-201ENST00000569373 2188 ntBASIC18.45■□□□□ 0.54
CHPFQ8IZ52 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHPFQ8IZ52 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 AP000347.1-202ENST00000435868 847 ntBASIC18.44■□□□□ 0.54
CHPFQ8IZ52 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 AC106795.1-205ENST00000512851 1056 ntBASIC18.44■□□□□ 0.54
CHPFQ8IZ52 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 SLC25A6P4-201ENST00000586535 553 ntBASIC18.44■□□□□ 0.54
CHPFQ8IZ52 BNIP3P18-201ENST00000593976 575 ntBASIC18.44■□□□□ 0.54
CHPFQ8IZ52 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 AL591684.3-201ENST00000605187 298 ntBASIC18.44■□□□□ 0.54
CHPFQ8IZ52 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CHPFQ8IZ52 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms