Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LDB1Q86U70 AP000523.1-201ENST00000398242 1049 ntBASIC18.14■□□□□ 0.49
LDB1Q86U70 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LDB1Q86U70 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 COX11P1-201ENST00000489116 835 ntBASIC18.14■□□□□ 0.49
LDB1Q86U70 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB1Q86U70 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.14■□□□□ 0.49
LDB1Q86U70 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
LDB1Q86U70 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB1Q86U70 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.14■□□□□ 0.49
LDB1Q86U70 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LDB1Q86U70 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.14■□□□□ 0.49
LDB1Q86U70 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LDB1Q86U70 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.13■□□□□ 0.49
LDB1Q86U70 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
LDB1Q86U70 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LDB1Q86U70 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.13■□□□□ 0.49
LDB1Q86U70 AC117947.1-201ENST00000427448 529 ntBASIC18.13■□□□□ 0.49
LDB1Q86U70 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.13■□□□□ 0.49
LDB1Q86U70 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.13■□□□□ 0.49
LDB1Q86U70 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LDB1Q86U70 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LDB1Q86U70 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LDB1Q86U70 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.13■□□□□ 0.49
LDB1Q86U70 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
LDB1Q86U70 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.12■□□□□ 0.49
LDB1Q86U70 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
LDB1Q86U70 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
LDB1Q86U70 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 SPDYE15P-201ENST00000424157 909 ntBASIC18.12■□□□□ 0.49
LDB1Q86U70 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 YBX1P2-201ENST00000489612 999 ntBASIC18.12■□□□□ 0.49
LDB1Q86U70 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.12■□□□□ 0.49
LDB1Q86U70 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LDB1Q86U70 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
LDB1Q86U70 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.12■□□□□ 0.49
LDB1Q86U70 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.12■□□□□ 0.49
LDB1Q86U70 LINC01023-201ENST00000606054 436 ntBASIC18.12■□□□□ 0.49
LDB1Q86U70 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.12■□□□□ 0.49
LDB1Q86U70 AC079602.3-201ENST00000623931 403 ntBASIC18.12■□□□□ 0.49
LDB1Q86U70 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.12■□□□□ 0.49
LDB1Q86U70 AC093010.1-201ENST00000473625 1624 ntBASIC18.12■□□□□ 0.49
LDB1Q86U70 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.12■□□□□ 0.49
LDB1Q86U70 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LDB1Q86U70 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
LDB1Q86U70 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LDB1Q86U70 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LDB1Q86U70 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 RASA4DP-201ENST00000460726 1199 ntBASIC18.11■□□□□ 0.49
LDB1Q86U70 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.11■□□□□ 0.49
LDB1Q86U70 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.11■□□□□ 0.49
LDB1Q86U70 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.11■□□□□ 0.49
LDB1Q86U70 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LDB1Q86U70 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
LDB1Q86U70 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.11■□□□□ 0.49
LDB1Q86U70 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.11■□□□□ 0.49
LDB1Q86U70 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LDB1Q86U70 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LDB1Q86U70 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms