Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 YBX1P5-201ENST00000509441 847 ntBASIC18.58■□□□□ 0.56
DENND4AQ7Z401 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DENND4AQ7Z401 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.58■□□□□ 0.56
DENND4AQ7Z401 AC027612.4-201ENST00000605371 583 ntBASIC18.58■□□□□ 0.56
DENND4AQ7Z401 LINC02084-201ENST00000606069 1096 ntBASIC18.58■□□□□ 0.56
DENND4AQ7Z401 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.58■□□□□ 0.56
DENND4AQ7Z401 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.58■□□□□ 0.56
DENND4AQ7Z401 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DENND4AQ7Z401 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DENND4AQ7Z401 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 AC096633.1-201ENST00000422446 749 ntBASIC18.57■□□□□ 0.56
DENND4AQ7Z401 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 PGM5P2-202ENST00000637225 1043 ntBASIC18.57■□□□□ 0.56
DENND4AQ7Z401 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.57■□□□□ 0.56
DENND4AQ7Z401 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 RFPL4AP1-201ENST00000530883 850 ntBASIC18.56■□□□□ 0.56
DENND4AQ7Z401 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 AD001527.2-201ENST00000622994 785 ntBASIC18.56■□□□□ 0.56
DENND4AQ7Z401 AP000867.4-201ENST00000641616 219 ntBASIC18.56■□□□□ 0.56
DENND4AQ7Z401 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
DENND4AQ7Z401 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.55■□□□□ 0.56
DENND4AQ7Z401 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 AC148477.5-201ENST00000625164 1645 ntBASIC18.55■□□□□ 0.56
DENND4AQ7Z401 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DENND4AQ7Z401 NCF1C-201ENST00000438382 1427 ntBASIC18.54■□□□□ 0.56
DENND4AQ7Z401 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms