Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 AC024243.1-201ENST00000609234 778 ntBASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHMP1BQ7LBR1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 GCSHP2-201ENST00000560971 527 ntBASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHMP1BQ7LBR1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 KRT8P7-201ENST00000533003 1432 ntBASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 KRT18P23-201ENST00000435622 1283 ntBASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 AC034236.2-201ENST00000606662 1610 ntBASIC16.74■□□□□ 0.27
CHMP1BQ7LBR1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms