Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CNKSR3Q6P9H4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 AC023274.1-201ENST00000418278 595 ntBASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 KRT18P27-201ENST00000427733 1299 ntBASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 AC005593.1-201ENST00000624894 515 ntBASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.46■□□□□ 0.71
CNKSR3Q6P9H4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 PMPCAP1-201ENST00000508114 1576 ntBASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 AC064836.3-201ENST00000607928 673 ntBASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 AC073592.4-201ENST00000623827 446 ntBASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNKSR3Q6P9H4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 DNAJB3-202ENST00000449667 1266 ntBASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNKSR3Q6P9H4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 AC122714.2-201ENST00000502787 707 ntBASIC19.43■□□□□ 0.7
CNKSR3Q6P9H4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms