Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 TSPY23P-201ENST00000440136 739 ntBASIC13.74□□□□□ -0.21
MRPL54Q6P161 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 AL031432.3-201ENST00000607698 485 ntBASIC13.74□□□□□ -0.21
MRPL54Q6P161 AC068587.9-201ENST00000641814 219 ntBASIC13.74□□□□□ -0.21
MRPL54Q6P161 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
MRPL54Q6P161 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
MRPL54Q6P161 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 KRT8P45-201ENST00000414328 1447 ntBASIC13.73□□□□□ -0.21
MRPL54Q6P161 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 KRT18P14-201ENST00000534205 1250 ntBASIC13.73□□□□□ -0.21
MRPL54Q6P161 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
MRPL54Q6P161 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
MRPL54Q6P161 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 HYMAI-201ENST00000635591 3347 ntBASIC13.72□□□□□ -0.21
MRPL54Q6P161 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 AL390719.1-204ENST00000412397 1219 ntBASIC13.72□□□□□ -0.21
MRPL54Q6P161 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms