Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 AC090340.1-201ENST00000620778 4980 ntBASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 AL096828.2-201ENST00000567259 1965 ntBASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 AC005332.3-201ENST00000589904 676 ntBASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 GPR32P1-201ENST00000601788 811 ntBASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 AL390719.2-201ENST00000606993 987 ntBASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 NEFHP1-201ENST00000412845 2629 ntBASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PPP4R3AQ6IN85 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 PCED1CP-201ENST00000419887 785 ntBASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 LINC00167-201ENST00000530583 1419 ntBASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.6■□□□□ 0.89
PPP4R3AQ6IN85 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 ABALON-201ENST00000629058 1903 ntBASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 AL354751.1-201ENST00000412768 1863 ntBASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 AC011498.5-201ENST00000592027 486 ntBASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PPP4R3AQ6IN85 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms