Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 HLA-F-220ENST00000434407 884 ntBASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 AC068880.1-201ENST00000507289 2297 ntBASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 HEIH-201ENST00000623091 1652 ntBASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SEL1L3Q68CR1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 AL357033.4-201ENST00000617703 1807 ntBASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 HCG4P8-203ENST00000443049 980 ntBASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SEL1L3Q68CR1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.52■□□□□ 0.55
SEL1L3Q68CR1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 AC011498.5-201ENST00000592027 486 ntBASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 AC073592.3-201ENST00000625118 1834 ntBASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 AL162741.1-201ENST00000565563 1558 ntBASIC18.51■□□□□ 0.55
SEL1L3Q68CR1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEL1L3Q68CR1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SEL1L3Q68CR1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.49■□□□□ 0.55
SEL1L3Q68CR1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms