Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 AC133681.1-201ENST00000465482 601 ntBASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 AL031985.4-201ENST00000642138 673 ntBASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 AC009102.3-201ENST00000623118 1491 ntBASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 AC124067.4-201ENST00000519691 2379 ntBASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 KRT16P1-201ENST00000399124 1418 ntBASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LINC00242Q5T6M2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 GPAT2P1-201ENST00000444924 1672 ntBASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 AP001094.4-201ENST00000579008 2176 ntBASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LINC00242Q5T6M2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 AL163051.1-201ENST00000569214 1512 ntBASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 MIR149-201ENST00000384879 89 ntBASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LINC00242Q5T6M2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms