Protein–RNA interactions for Protein: Q5T4F4

ZFYVE27, Protrudin, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE27Q5T4F4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZFYVE27Q5T4F4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZFYVE27Q5T4F4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 REXO1L9P-201ENST00000604264 2108 ntBASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 AC066615.1-201ENST00000640911 628 ntBASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 AC116562.4-202ENST00000641738 218 ntBASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 PKD1P5-201ENST00000532415 10291 ntBASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.27■□□□□ 0.68
ZFYVE27Q5T4F4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZFYVE27Q5T4F4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZFYVE27Q5T4F4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZFYVE27Q5T4F4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
ZFYVE27Q5T4F4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZFYVE27Q5T4F4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 KRT8P50-201ENST00000562022 1438 ntBASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 KRT18P23-201ENST00000435622 1283 ntBASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFYVE27Q5T4F4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 GMCL1P1-201ENST00000463439 1581 ntBASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 BX088651.1-201ENST00000540551 451 ntBASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 AL355075.4-201ENST00000554988 638 ntBASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 FITM1-202ENST00000559294 800 ntBASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 AL353719.1-201ENST00000566847 864 ntBASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFYVE27Q5T4F4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.24■□□□□ 0.67
ZFYVE27Q5T4F4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFYVE27Q5T4F4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZFYVE27Q5T4F4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.24■□□□□ 0.67
ZFYVE27Q5T4F4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms