Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 ANO7L1-203ENST00000602586 1720 ntBASIC18.4■□□□□ 0.54
KHDC1Q4VXA5 AC073592.3-201ENST00000625118 1834 ntBASIC18.39■□□□□ 0.54
KHDC1Q4VXA5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
KHDC1Q4VXA5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KHDC1Q4VXA5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
KHDC1Q4VXA5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
KHDC1Q4VXA5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KHDC1Q4VXA5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
KHDC1Q4VXA5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 AC034236.2-201ENST00000606662 1610 ntBASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 KRT18P23-201ENST00000435622 1283 ntBASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 SEC1P-202ENST00000473944 940 ntBASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KHDC1Q4VXA5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 RNF152P1-201ENST00000397754 604 ntBASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 AC112497.1-201ENST00000624824 639 ntBASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 HOXB1-202ENST00000577092 1414 ntBASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KHDC1Q4VXA5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KHDC1Q4VXA5 TSPY5P-201ENST00000426936 936 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms