Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC153Q494R4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC153Q494R4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 AL359736.2-201ENST00000621992 437 ntBASIC17.97■□□□□ 0.47
CCDC153Q494R4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC153Q494R4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC153Q494R4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.96■□□□□ 0.47
CCDC153Q494R4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC153Q494R4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC153Q494R4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC153Q494R4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.46
CCDC153Q494R4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
CCDC153Q494R4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 AC141586.5-201ENST00000624546 2050 ntBASIC17.95■□□□□ 0.46
CCDC153Q494R4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 PP12613-201ENST00000424958 2230 ntBASIC17.95■□□□□ 0.46
CCDC153Q494R4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC153Q494R4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC153Q494R4 AL023806.1-201ENST00000603994 1649 ntBASIC17.94■□□□□ 0.46
CCDC153Q494R4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 CRYGFP-201ENST00000418459 633 ntBASIC17.94■□□□□ 0.46
CCDC153Q494R4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 MIR3180-4-201ENST00000582223 153 ntBASIC17.94■□□□□ 0.46
CCDC153Q494R4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC153Q494R4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC153Q494R4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms