Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CDH17Q12864 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CDH17Q12864 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH17Q12864 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH17Q12864 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH17Q12864 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDH17Q12864 AC073912.3-201ENST00000624414 853 ntBASIC18.36■□□□□ 0.53
CDH17Q12864 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDH17Q12864 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH17Q12864 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDH17Q12864 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDH17Q12864 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDH17Q12864 PCDHB18P-201ENST00000524813 2368 ntBASIC18.35■□□□□ 0.53
CDH17Q12864 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDH17Q12864 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH17Q12864 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH17Q12864 AC034232.1-201ENST00000506026 1064 ntBASIC18.35■□□□□ 0.53
CDH17Q12864 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH17Q12864 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 GCSHP2-201ENST00000560971 527 ntBASIC18.35■□□□□ 0.53
CDH17Q12864 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH17Q12864 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 AC133561.5-201ENST00000635547 218 ntBASIC18.35■□□□□ 0.53
CDH17Q12864 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 AC134043.2-201ENST00000624206 2238 ntBASIC18.35■□□□□ 0.53
CDH17Q12864 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 AC026471.1-201ENST00000564629 3026 ntBASIC18.35■□□□□ 0.53
CDH17Q12864 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH17Q12864 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH17Q12864 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CDH17Q12864 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH17Q12864 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH17Q12864 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDH17Q12864 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDH17Q12864 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDH17Q12864 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CDH17Q12864 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDH17Q12864 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CDH17Q12864 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH17Q12864 ATP5G1P1-201ENST00000448724 379 ntBASIC18.34■□□□□ 0.53
CDH17Q12864 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH17Q12864 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CDH17Q12864 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH17Q12864 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.34■□□□□ 0.53
CDH17Q12864 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH17Q12864 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH17Q12864 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CDH17Q12864 AL031432.5-201ENST00000641059 760 ntBASIC18.34■□□□□ 0.53
CDH17Q12864 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH17Q12864 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH17Q12864 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH17Q12864 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH17Q12864 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH17Q12864 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH17Q12864 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH17Q12864 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH17Q12864 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH17Q12864 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms