Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.94■□□□□ 0.78
KCNA1Q09470 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.94■□□□□ 0.78
KCNA1Q09470 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.94■□□□□ 0.78
KCNA1Q09470 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.94■□□□□ 0.78
KCNA1Q09470 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
KCNA1Q09470 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.94■□□□□ 0.78
KCNA1Q09470 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
KCNA1Q09470 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KCNA1Q09470 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.93■□□□□ 0.78
KCNA1Q09470 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 AC138028.4-201ENST00000564984 1845 ntBASIC19.93■□□□□ 0.78
KCNA1Q09470 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 FAM86EP-206ENST00000510506 987 ntBASIC19.93■□□□□ 0.78
KCNA1Q09470 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.93■□□□□ 0.78
KCNA1Q09470 AC004263.2-201ENST00000617183 678 ntBASIC19.93■□□□□ 0.78
KCNA1Q09470 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.93■□□□□ 0.78
KCNA1Q09470 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
KCNA1Q09470 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.93■□□□□ 0.78
KCNA1Q09470 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.93■□□□□ 0.78
KCNA1Q09470 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
KCNA1Q09470 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KCNA1Q09470 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.93■□□□□ 0.78
KCNA1Q09470 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
KCNA1Q09470 KRT89P-201ENST00000620027 1478 ntBASIC19.92■□□□□ 0.78
KCNA1Q09470 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.92■□□□□ 0.78
KCNA1Q09470 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
KCNA1Q09470 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.92■□□□□ 0.78
KCNA1Q09470 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 KRT18P48-201ENST00000434763 852 ntBASIC19.92■□□□□ 0.78
KCNA1Q09470 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.92■□□□□ 0.78
KCNA1Q09470 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.92■□□□□ 0.78
KCNA1Q09470 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.92■□□□□ 0.78
KCNA1Q09470 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.92■□□□□ 0.78
KCNA1Q09470 AC087388.1-201ENST00000571370 1112 ntBASIC19.92■□□□□ 0.78
KCNA1Q09470 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.92■□□□□ 0.78
KCNA1Q09470 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
KCNA1Q09470 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.92■□□□□ 0.78
KCNA1Q09470 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
KCNA1Q09470 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
KCNA1Q09470 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.92■□□□□ 0.78
KCNA1Q09470 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KCNA1Q09470 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNA1Q09470 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA1Q09470 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNA1Q09470 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KCNA1Q09470 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA1Q09470 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA1Q09470 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNA1Q09470 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA1Q09470 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA1Q09470 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KCNA1Q09470 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNA1Q09470 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
KCNA1Q09470 IGHGP-201ENST00000390555 1178 ntBASIC19.91■□□□□ 0.78
KCNA1Q09470 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.91■□□□□ 0.78
KCNA1Q09470 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.91■□□□□ 0.78
KCNA1Q09470 AP003733.1-201ENST00000491725 852 ntBASIC19.91■□□□□ 0.78
KCNA1Q09470 AC113404.2-201ENST00000507884 177 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms