Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LRP1Q07954 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 AC093484.2-201ENST00000580996 2166 ntBASIC10.67□□□□□ -0.7
LRP1Q07954 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 COPE-202ENST00000349893 948 ntTSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC10.67□□□□□ -0.7
LRP1Q07954 AC004706.3-202ENST00000621574 984 ntBASIC10.67□□□□□ -0.7
LRP1Q07954 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
LRP1Q07954 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 AL032819.2-201ENST00000624543 2162 ntBASIC10.67□□□□□ -0.7
LRP1Q07954 ASL-204ENST00000395331 1538 ntTSL 5 BASIC10.67□□□□□ -0.7
LRP1Q07954 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC10.67□□□□□ -0.7
LRP1Q07954 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC10.67□□□□□ -0.7
LRP1Q07954 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC10.67□□□□□ -0.7
LRP1Q07954 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC10.67□□□□□ -0.7
LRP1Q07954 AC136632.2-201ENST00000512891 861 ntBASIC10.67□□□□□ -0.7
LRP1Q07954 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC10.67□□□□□ -0.7
LRP1Q07954 METTL23-205ENST00000588302 925 ntTSL 5 BASIC10.67□□□□□ -0.7
LRP1Q07954 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC10.67□□□□□ -0.7
LRP1Q07954 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRP1Q07954 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10.67□□□□□ -0.7
LRP1Q07954 AC141586.3-201ENST00000562166 1838 ntBASIC10.67□□□□□ -0.7
LRP1Q07954 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.66□□□□□ -0.7
LRP1Q07954 BX005266.1-201ENST00000473402 457 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 C20orf181-201ENST00000623918 480 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 Z92544.3-201ENST00000624747 417 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
LRP1Q07954 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.66□□□□□ -0.7
LRP1Q07954 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 AC007274.1-201ENST00000439805 662 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC10.66□□□□□ -0.7
LRP1Q07954 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 AC005593.1-201ENST00000624894 515 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 AC132938.6-201ENST00000623828 1655 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC10.66□□□□□ -0.7
LRP1Q07954 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC10.66□□□□□ -0.7
LRP1Q07954 CEND1P1-201ENST00000451006 455 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 AC093512.1-201ENST00000617969 520 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC10.66□□□□□ -0.7
LRP1Q07954 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRP1Q07954 LINC01126-201ENST00000623515 1646 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 GPR89P-201ENST00000407924 1495 ntBASIC10.66□□□□□ -0.7
LRP1Q07954 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LRP1Q07954 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC10.65□□□□□ -0.7
LRP1Q07954 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRP1Q07954 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRP1Q07954 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LRP1Q07954 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms