Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL20P78556 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CCL20P78556 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL20P78556 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CCL20P78556 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL20P78556 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL20P78556 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.31□□□□□ -0.12
CCL20P78556 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL20P78556 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.31□□□□□ -0.12
CCL20P78556 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL20P78556 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL20P78556 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL20P78556 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL20P78556 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCL20P78556 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCL20P78556 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL20P78556 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CCL20P78556 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL20P78556 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL20P78556 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.3□□□□□ -0.12
CCL20P78556 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL20P78556 DUX4L16-201ENST00000555130 1264 ntBASIC14.3□□□□□ -0.12
CCL20P78556 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL20P78556 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL20P78556 AC142381.2-201ENST00000566120 298 ntBASIC14.3□□□□□ -0.12
CCL20P78556 AL121906.2-201ENST00000621597 723 ntBASIC14.3□□□□□ -0.12
CCL20P78556 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCL20P78556 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCL20P78556 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCL20P78556 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CCL20P78556 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL20P78556 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL20P78556 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL20P78556 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL20P78556 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL20P78556 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL20P78556 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CCL20P78556 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL20P78556 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CCL20P78556 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CCL20P78556 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CCL20P78556 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.29□□□□□ -0.12
CCL20P78556 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 HTR7P1-201ENST00000538670 1336 ntBASIC14.29□□□□□ -0.12
CCL20P78556 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCL20P78556 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 KRT8P41-201ENST00000533985 1514 ntBASIC14.29□□□□□ -0.12
CCL20P78556 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL20P78556 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL20P78556 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL20P78556 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms