Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 KRT18P55-202ENST00000578578 1546 ntBASIC15.88■□□□□ 0.13
HIST1H3AP68431 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H3AP68431 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H3AP68431 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 AC132938.6-201ENST00000623828 1655 ntBASIC15.87■□□□□ 0.13
HIST1H3AP68431 KRT89P-201ENST00000620027 1478 ntBASIC15.87■□□□□ 0.13
HIST1H3AP68431 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.87■□□□□ 0.13
HIST1H3AP68431 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 AC113404.2-201ENST00000507884 177 ntBASIC15.87■□□□□ 0.13
HIST1H3AP68431 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 AC011558.1-201ENST00000623459 338 ntBASIC15.87■□□□□ 0.13
HIST1H3AP68431 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H3AP68431 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H3AP68431 LINC00167-201ENST00000530583 1419 ntBASIC15.86■□□□□ 0.13
HIST1H3AP68431 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H3AP68431 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H3AP68431 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H3AP68431 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H3AP68431 AC079602.3-201ENST00000623931 403 ntBASIC15.86■□□□□ 0.13
HIST1H3AP68431 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H3AP68431 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 AC018470.1-201ENST00000624790 3129 ntBASIC15.86■□□□□ 0.13
HIST1H3AP68431 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H3AP68431 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H3AP68431 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.86■□□□□ 0.13
HIST1H3AP68431 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 STARP1-201ENST00000397973 869 ntBASIC15.85■□□□□ 0.13
HIST1H3AP68431 AC211429.1-201ENST00000415277 523 ntBASIC15.85■□□□□ 0.13
HIST1H3AP68431 YBX1P2-201ENST00000489612 999 ntBASIC15.85■□□□□ 0.13
HIST1H3AP68431 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
HIST1H3AP68431 AC139887.4-201ENST00000607877 719 ntBASIC15.85■□□□□ 0.13
HIST1H3AP68431 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H3AP68431 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms