Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TPM4P67936 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 MCCD1P1-208ENST00000445732 328 ntBASIC20.37■□□□□ 0.85
TPM4P67936 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.37■□□□□ 0.85
TPM4P67936 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.37■□□□□ 0.85
TPM4P67936 AC110285.5-201ENST00000611501 352 ntBASIC20.37■□□□□ 0.85
TPM4P67936 AL031985.4-201ENST00000642138 673 ntBASIC20.37■□□□□ 0.85
TPM4P67936 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM4P67936 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TPM4P67936 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.37■□□□□ 0.85
TPM4P67936 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.37■□□□□ 0.85
TPM4P67936 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TPM4P67936 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM4P67936 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM4P67936 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TPM4P67936 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 RPS2P4-201ENST00000476944 856 ntBASIC20.36■□□□□ 0.85
TPM4P67936 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 AC233263.1-201ENST00000578059 224 ntBASIC20.36■□□□□ 0.85
TPM4P67936 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.36■□□□□ 0.85
TPM4P67936 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.36■□□□□ 0.85
TPM4P67936 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TPM4P67936 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM4P67936 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM4P67936 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.36■□□□□ 0.85
TPM4P67936 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TPM4P67936 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TPM4P67936 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.35■□□□□ 0.85
TPM4P67936 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.35■□□□□ 0.85
TPM4P67936 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TPM4P67936 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TPM4P67936 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.35■□□□□ 0.85
TPM4P67936 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 AL353807.1-201ENST00000427475 662 ntBASIC20.35■□□□□ 0.85
TPM4P67936 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.35■□□□□ 0.85
TPM4P67936 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
TPM4P67936 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.35■□□□□ 0.85
TPM4P67936 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.35■□□□□ 0.85
TPM4P67936 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TPM4P67936 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.35■□□□□ 0.85
TPM4P67936 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.35■□□□□ 0.85
TPM4P67936 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.35■□□□□ 0.85
TPM4P67936 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TPM4P67936 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TPM4P67936 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.35■□□□□ 0.85
TPM4P67936 AL645608.8-201ENST00000606034 2086 ntBASIC20.34■□□□□ 0.85
TPM4P67936 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TPM4P67936 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 AC006116.8-202ENST00000587620 1550 ntBASIC20.34■□□□□ 0.85
TPM4P67936 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TPM4P67936 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms