Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 RN7SL606P-201ENST00000472779 293 ntBASIC18.25■□□□□ 0.51
AP1S1P61966 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.25■□□□□ 0.51
AP1S1P61966 AL592071.1-201ENST00000611956 408 ntBASIC18.25■□□□□ 0.51
AP1S1P61966 IGHV3-41-201ENST00000613121 348 ntBASIC18.25■□□□□ 0.51
AP1S1P61966 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.25■□□□□ 0.51
AP1S1P61966 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.25■□□□□ 0.51
AP1S1P61966 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
AP1S1P61966 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 ABALON-201ENST00000629058 1903 ntBASIC18.25■□□□□ 0.51
AP1S1P61966 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
AP1S1P61966 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.25■□□□□ 0.51
AP1S1P61966 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.25■□□□□ 0.51
AP1S1P61966 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S1P61966 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
AP1S1P61966 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.24■□□□□ 0.51
AP1S1P61966 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.24■□□□□ 0.51
AP1S1P61966 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
AP1S1P61966 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
AP1S1P61966 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.24■□□□□ 0.51
AP1S1P61966 ATP5G2P1-201ENST00000433580 426 ntBASIC18.24■□□□□ 0.51
AP1S1P61966 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.24■□□□□ 0.51
AP1S1P61966 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.24■□□□□ 0.51
AP1S1P61966 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.24■□□□□ 0.51
AP1S1P61966 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.24■□□□□ 0.51
AP1S1P61966 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
AP1S1P61966 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.24■□□□□ 0.51
AP1S1P61966 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP1S1P61966 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.23■□□□□ 0.51
AP1S1P61966 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
AP1S1P61966 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
AP1S1P61966 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.23■□□□□ 0.51
AP1S1P61966 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 NPAP1P7-201ENST00000613027 823 ntBASIC18.23■□□□□ 0.51
AP1S1P61966 AC093458.2-201ENST00000623150 629 ntBASIC18.23■□□□□ 0.51
AP1S1P61966 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.23■□□□□ 0.51
AP1S1P61966 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 AC135050.7-201ENST00000624508 2218 ntBASIC18.23■□□□□ 0.51
AP1S1P61966 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.23■□□□□ 0.51
AP1S1P61966 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
AP1S1P61966 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.23■□□□□ 0.51
AP1S1P61966 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.23■□□□□ 0.51
AP1S1P61966 HCG11-201ENST00000411553 5696 ntBASIC18.23■□□□□ 0.51
AP1S1P61966 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP1S1P61966 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.22■□□□□ 0.51
AP1S1P61966 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
AP1S1P61966 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.22■□□□□ 0.51
AP1S1P61966 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.22■□□□□ 0.51
AP1S1P61966 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP1S1P61966 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms