Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.57■□□□□ 0.24
CXCR4P61073 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
CXCR4P61073 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.57■□□□□ 0.24
CXCR4P61073 AC018695.7-201ENST00000624587 2492 ntBASIC16.57■□□□□ 0.24
CXCR4P61073 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.57■□□□□ 0.24
CXCR4P61073 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 AL355312.1-201ENST00000407115 2176 ntBASIC16.57■□□□□ 0.24
CXCR4P61073 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CXCR4P61073 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CXCR4P61073 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CXCR4P61073 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.56■□□□□ 0.24
CXCR4P61073 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 AC133963.1-201ENST00000504166 1679 ntBASIC16.56■□□□□ 0.24
CXCR4P61073 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.56■□□□□ 0.24
CXCR4P61073 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 AC093010.1-201ENST00000473625 1624 ntBASIC16.56■□□□□ 0.24
CXCR4P61073 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.56■□□□□ 0.24
CXCR4P61073 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CXCR4P61073 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 KRASP1-201ENST00000407852 552 ntBASIC16.56■□□□□ 0.24
CXCR4P61073 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.56■□□□□ 0.24
CXCR4P61073 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 RNA5SP413-201ENST00000516373 109 ntBASIC16.56■□□□□ 0.24
CXCR4P61073 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.56■□□□□ 0.24
CXCR4P61073 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.56■□□□□ 0.24
CXCR4P61073 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CXCR4P61073 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.56■□□□□ 0.24
CXCR4P61073 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.56■□□□□ 0.24
CXCR4P61073 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.56■□□□□ 0.24
CXCR4P61073 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CXCR4P61073 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CXCR4P61073 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CXCR4P61073 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CXCR4P61073 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.55■□□□□ 0.24
CXCR4P61073 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.55■□□□□ 0.24
CXCR4P61073 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CXCR4P61073 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.55■□□□□ 0.24
CXCR4P61073 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.55■□□□□ 0.24
CXCR4P61073 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.55■□□□□ 0.24
CXCR4P61073 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
CXCR4P61073 AC026366.1-201ENST00000488803 879 ntBASIC16.55■□□□□ 0.24
CXCR4P61073 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.55■□□□□ 0.24
CXCR4P61073 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CXCR4P61073 AL445675.2-201ENST00000620291 557 ntBASIC16.55■□□□□ 0.24
CXCR4P61073 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.55■□□□□ 0.24
CXCR4P61073 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.55■□□□□ 0.24
CXCR4P61073 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.55■□□□□ 0.24
CXCR4P61073 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CXCR4P61073 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.55■□□□□ 0.24
CXCR4P61073 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CXCR4P61073 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CXCR4P61073 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CXCR4P61073 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.54■□□□□ 0.24
CXCR4P61073 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CXCR4P61073 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.54■□□□□ 0.24
CXCR4P61073 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms