Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SMIM11AP58511 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.76■□□□□ 0.27
SMIM11AP58511 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.76■□□□□ 0.27
SMIM11AP58511 FAM197Y1-201ENST00000421178 764 ntBASIC16.76■□□□□ 0.27
SMIM11AP58511 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.76■□□□□ 0.27
SMIM11AP58511 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.76■□□□□ 0.27
SMIM11AP58511 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 CD177P1-201ENST00000606252 935 ntBASIC16.76■□□□□ 0.27
SMIM11AP58511 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
SMIM11AP58511 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.76■□□□□ 0.27
SMIM11AP58511 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SMIM11AP58511 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 FZD10-202ENST00000539839 3282 ntBASIC16.76■□□□□ 0.27
SMIM11AP58511 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SMIM11AP58511 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SMIM11AP58511 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
SMIM11AP58511 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SMIM11AP58511 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.75■□□□□ 0.27
SMIM11AP58511 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SMIM11AP58511 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.75■□□□□ 0.27
SMIM11AP58511 AC116562.2-201ENST00000507042 360 ntBASIC16.75■□□□□ 0.27
SMIM11AP58511 AC097488.1-201ENST00000507834 756 ntBASIC16.75■□□□□ 0.27
SMIM11AP58511 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.75■□□□□ 0.27
SMIM11AP58511 FAM197Y4-202ENST00000622692 608 ntBASIC16.75■□□□□ 0.27
SMIM11AP58511 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.75■□□□□ 0.27
SMIM11AP58511 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.75■□□□□ 0.27
SMIM11AP58511 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SMIM11AP58511 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SMIM11AP58511 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SMIM11AP58511 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SMIM11AP58511 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMIM11AP58511 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
SMIM11AP58511 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SMIM11AP58511 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMIM11AP58511 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.74■□□□□ 0.27
SMIM11AP58511 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SMIM11AP58511 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.74■□□□□ 0.27
SMIM11AP58511 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.74■□□□□ 0.27
SMIM11AP58511 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.74■□□□□ 0.27
SMIM11AP58511 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.74■□□□□ 0.27
SMIM11AP58511 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.74■□□□□ 0.27
SMIM11AP58511 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.74■□□□□ 0.27
SMIM11AP58511 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.74■□□□□ 0.27
SMIM11AP58511 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.74■□□□□ 0.27
SMIM11AP58511 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.74■□□□□ 0.27
SMIM11AP58511 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
SMIM11AP58511 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SMIM11AP58511 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.74■□□□□ 0.27
SMIM11AP58511 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SMIM11AP58511 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SMIM11AP58511 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SMIM11AP58511 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SMIM11AP58511 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SMIM11AP58511 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SMIM11AP58511 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms