Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.17□□□□□ -0.14
FAM3BP58499 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 LINC00602-201ENST00000629776 2065 ntBASIC14.17□□□□□ -0.14
FAM3BP58499 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FAM3BP58499 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM3BP58499 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM3BP58499 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
FAM3BP58499 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FAM3BP58499 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
FAM3BP58499 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.16□□□□□ -0.14
FAM3BP58499 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.16□□□□□ -0.14
FAM3BP58499 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 AC008741.2-201ENST00000612792 3115 ntBASIC14.16□□□□□ -0.14
FAM3BP58499 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.16□□□□□ -0.14
FAM3BP58499 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.16□□□□□ -0.14
FAM3BP58499 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FAM3BP58499 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.16□□□□□ -0.14
FAM3BP58499 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
FAM3BP58499 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
FAM3BP58499 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.16□□□□□ -0.14
FAM3BP58499 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.16□□□□□ -0.14
FAM3BP58499 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
FAM3BP58499 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 HLA-B-256ENST00000639848 1089 ntBASIC14.16□□□□□ -0.14
FAM3BP58499 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
FAM3BP58499 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.16□□□□□ -0.14
FAM3BP58499 DOC2GP-204ENST00000639052 2548 ntBASIC14.16□□□□□ -0.14
FAM3BP58499 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.16□□□□□ -0.14
FAM3BP58499 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM3BP58499 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.15□□□□□ -0.14
FAM3BP58499 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
FAM3BP58499 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FAM3BP58499 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FAM3BP58499 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
FAM3BP58499 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FAM3BP58499 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
FAM3BP58499 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
FAM3BP58499 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FAM3BP58499 AC103702.1-201ENST00000548801 2630 ntBASIC14.15□□□□□ -0.14
FAM3BP58499 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.15□□□□□ -0.14
FAM3BP58499 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FAM3BP58499 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
FAM3BP58499 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.15□□□□□ -0.14
FAM3BP58499 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
FAM3BP58499 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
FAM3BP58499 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
FAM3BP58499 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms