Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.01■□□□□ 0.15
CCR9P51686 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.01■□□□□ 0.15
CCR9P51686 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.01■□□□□ 0.15
CCR9P51686 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.01■□□□□ 0.15
CCR9P51686 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.01■□□□□ 0.15
CCR9P51686 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.01■□□□□ 0.15
CCR9P51686 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CCR9P51686 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.01■□□□□ 0.15
CCR9P51686 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.01■□□□□ 0.15
CCR9P51686 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCR9P51686 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 AC093010.1-201ENST00000473625 1624 ntBASIC16.01■□□□□ 0.15
CCR9P51686 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.01■□□□□ 0.15
CCR9P51686 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCR9P51686 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16■□□□□ 0.15
CCR9P51686 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCR9P51686 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCR9P51686 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16■□□□□ 0.15
CCR9P51686 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 FAM197Y1-201ENST00000421178 764 ntBASIC16■□□□□ 0.15
CCR9P51686 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16■□□□□ 0.15
CCR9P51686 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 SLC25A1P4-201ENST00000567977 778 ntBASIC16■□□□□ 0.15
CCR9P51686 CD177P1-201ENST00000606252 935 ntBASIC16■□□□□ 0.15
CCR9P51686 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16■□□□□ 0.15
CCR9P51686 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16■□□□□ 0.15
CCR9P51686 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CCR9P51686 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCR9P51686 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16■□□□□ 0.15
CCR9P51686 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCR9P51686 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16■□□□□ 0.15
CCR9P51686 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CCR9P51686 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CCR9P51686 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.99■□□□□ 0.15
CCR9P51686 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.99■□□□□ 0.15
CCR9P51686 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.99■□□□□ 0.15
CCR9P51686 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.99■□□□□ 0.15
CCR9P51686 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CCR9P51686 AC108860.2-201ENST00000562760 2183 ntBASIC15.99■□□□□ 0.15
CCR9P51686 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCR9P51686 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCR9P51686 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCR9P51686 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCR9P51686 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.98■□□□□ 0.15
CCR9P51686 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCR9P51686 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCR9P51686 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.98■□□□□ 0.15
CCR9P51686 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCR9P51686 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCR9P51686 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCR9P51686 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCR9P51686 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CCR9P51686 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CCR9P51686 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms