Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BRCA2P51587 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.21■□□□□ 0.83
BRCA2P51587 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.21■□□□□ 0.83
BRCA2P51587 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.21■□□□□ 0.83
BRCA2P51587 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.21■□□□□ 0.83
BRCA2P51587 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.21■□□□□ 0.83
BRCA2P51587 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.21■□□□□ 0.83
BRCA2P51587 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.21■□□□□ 0.83
BRCA2P51587 AC018845.2-201ENST00000568326 409 ntBASIC20.21■□□□□ 0.83
BRCA2P51587 AC006504.4-201ENST00000592118 1568 ntBASIC20.21■□□□□ 0.83
BRCA2P51587 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
BRCA2P51587 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
BRCA2P51587 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 UGT1A2P-201ENST00000454886 866 ntBASIC20.21■□□□□ 0.83
BRCA2P51587 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.21■□□□□ 0.83
BRCA2P51587 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.21■□□□□ 0.83
BRCA2P51587 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.21■□□□□ 0.83
BRCA2P51587 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.21■□□□□ 0.83
BRCA2P51587 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.21■□□□□ 0.83
BRCA2P51587 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
BRCA2P51587 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
BRCA2P51587 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.21■□□□□ 0.83
BRCA2P51587 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.21■□□□□ 0.83
BRCA2P51587 AC079776.2-201ENST00000641154 1609 ntBASIC20.21■□□□□ 0.83
BRCA2P51587 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BRCA2P51587 AL024508.2-201ENST00000607749 1894 ntBASIC20.21■□□□□ 0.83
BRCA2P51587 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.2■□□□□ 0.82
BRCA2P51587 AC136632.2-201ENST00000512891 861 ntBASIC20.2■□□□□ 0.82
BRCA2P51587 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
BRCA2P51587 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRCA2P51587 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRCA2P51587 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRCA2P51587 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRCA2P51587 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRCA2P51587 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.2■□□□□ 0.82
BRCA2P51587 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.2■□□□□ 0.82
BRCA2P51587 DUX4L17-201ENST00000557360 1267 ntBASIC20.2■□□□□ 0.82
BRCA2P51587 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.2■□□□□ 0.82
BRCA2P51587 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRCA2P51587 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BRCA2P51587 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
BRCA2P51587 MIR661-201ENST00000384842 89 ntBASIC20.2■□□□□ 0.82
BRCA2P51587 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.2■□□□□ 0.82
BRCA2P51587 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.2■□□□□ 0.82
BRCA2P51587 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.2■□□□□ 0.82
BRCA2P51587 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.2■□□□□ 0.82
BRCA2P51587 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.2■□□□□ 0.82
BRCA2P51587 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.19■□□□□ 0.82
BRCA2P51587 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.19■□□□□ 0.82
BRCA2P51587 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
BRCA2P51587 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.19■□□□□ 0.82
BRCA2P51587 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 AC015922.1-201ENST00000421102 1152 ntBASIC20.19■□□□□ 0.82
BRCA2P51587 HCG4B-203ENST00000450128 991 ntBASIC20.19■□□□□ 0.82
BRCA2P51587 AC023141.5-201ENST00000458585 616 ntBASIC20.19■□□□□ 0.82
BRCA2P51587 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.19■□□□□ 0.82
BRCA2P51587 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.19■□□□□ 0.82
BRCA2P51587 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
BRCA2P51587 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.19■□□□□ 0.82
BRCA2P51587 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
BRCA2P51587 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.19■□□□□ 0.82
BRCA2P51587 AC092474.2-201ENST00000424288 719 ntBASIC20.19■□□□□ 0.82
BRCA2P51587 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.19■□□□□ 0.82
BRCA2P51587 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.19■□□□□ 0.82
BRCA2P51587 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.19■□□□□ 0.82
BRCA2P51587 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.19■□□□□ 0.82
BRCA2P51587 KRT18P41-201ENST00000518924 1277 ntBASIC20.19■□□□□ 0.82
BRCA2P51587 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.19■□□□□ 0.82
BRCA2P51587 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.19■□□□□ 0.82
BRCA2P51587 OR7E47P-204ENST00000575924 449 ntBASIC20.19■□□□□ 0.82
BRCA2P51587 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.19■□□□□ 0.82
BRCA2P51587 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.19■□□□□ 0.82
BRCA2P51587 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.19■□□□□ 0.82
BRCA2P51587 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.19■□□□□ 0.82
BRCA2P51587 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BRCA2P51587 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.18■□□□□ 0.82
BRCA2P51587 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.18■□□□□ 0.82
BRCA2P51587 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.18■□□□□ 0.82
BRCA2P51587 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.18■□□□□ 0.82
BRCA2P51587 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC20.18■□□□□ 0.82
BRCA2P51587 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms