Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CDC34P49427 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CDC34P49427 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDC34P49427 POU5F1P3-201ENST00000428824 1078 ntBASIC14.37□□□□□ -0.11
CDC34P49427 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC34P49427 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC34P49427 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.37□□□□□ -0.11
CDC34P49427 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC34P49427 AC008894.3-201ENST00000624324 3103 ntBASIC14.37□□□□□ -0.11
CDC34P49427 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CDC34P49427 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC34P49427 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC34P49427 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC34P49427 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CDC34P49427 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 FLJ16779-201ENST00000612722 7638 ntBASIC14.37□□□□□ -0.11
CDC34P49427 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC34P49427 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CDC34P49427 RCC2P3-201ENST00000418112 1537 ntBASIC14.36□□□□□ -0.11
CDC34P49427 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC34P49427 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.36□□□□□ -0.11
CDC34P49427 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.36□□□□□ -0.11
CDC34P49427 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 PHGDH-209ENST00000641074 1780 ntBASIC14.36□□□□□ -0.11
CDC34P49427 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC34P49427 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDC34P49427 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC34P49427 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CDC34P49427 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC34P49427 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
CDC34P49427 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 LINC00602-201ENST00000629776 2065 ntBASIC14.35□□□□□ -0.11
CDC34P49427 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDC34P49427 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 KRT8P11-201ENST00000409686 1436 ntBASIC14.35□□□□□ -0.11
CDC34P49427 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.35□□□□□ -0.11
CDC34P49427 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.35□□□□□ -0.11
CDC34P49427 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CDC34P49427 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.35□□□□□ -0.11
CDC34P49427 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 PRSS44-201ENST00000515154 1146 ntBASIC14.35□□□□□ -0.11
CDC34P49427 KRT18P41-201ENST00000518924 1277 ntBASIC14.35□□□□□ -0.11
CDC34P49427 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.35□□□□□ -0.11
CDC34P49427 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC34P49427 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.35□□□□□ -0.11
CDC34P49427 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 HLA-B-256ENST00000639848 1089 ntBASIC14.35□□□□□ -0.11
CDC34P49427 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CDC34P49427 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDC34P49427 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC34P49427 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms