Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PCP4P48539 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
PCP4P48539 AC099521.3-201ENST00000624251 2938 ntBASIC12.47□□□□□ -0.41
PCP4P48539 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
PCP4P48539 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
PCP4P48539 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
PCP4P48539 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.47□□□□□ -0.41
PCP4P48539 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
PCP4P48539 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.47□□□□□ -0.41
PCP4P48539 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
PCP4P48539 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCP4P48539 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.47□□□□□ -0.41
PCP4P48539 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.47□□□□□ -0.41
PCP4P48539 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
PCP4P48539 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.46□□□□□ -0.41
PCP4P48539 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
PCP4P48539 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PCP4P48539 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.46□□□□□ -0.41
PCP4P48539 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.46□□□□□ -0.41
PCP4P48539 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.46□□□□□ -0.41
PCP4P48539 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.46□□□□□ -0.41
PCP4P48539 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
PCP4P48539 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCP4P48539 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
PCP4P48539 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
PCP4P48539 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
PCP4P48539 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.46□□□□□ -0.42
PCP4P48539 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
PCP4P48539 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC12.46□□□□□ -0.42
PCP4P48539 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.46□□□□□ -0.42
PCP4P48539 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCP4P48539 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PCP4P48539 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PCP4P48539 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.45□□□□□ -0.42
PCP4P48539 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PCP4P48539 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PCP4P48539 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PCP4P48539 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.45□□□□□ -0.42
PCP4P48539 AC104564.3-201ENST00000582367 638 ntBASIC12.45□□□□□ -0.42
PCP4P48539 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.45□□□□□ -0.42
PCP4P48539 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 AC138969.2-201ENST00000532739 9932 ntBASIC12.45□□□□□ -0.42
PCP4P48539 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.45□□□□□ -0.42
PCP4P48539 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCP4P48539 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms