Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GNAS-203ENST00000306120 1878 ntBASIC17.52■□□□□ 0.4
SLC6A12P48065 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC6A12P48065 AC134043.2-201ENST00000624206 2238 ntBASIC17.52■□□□□ 0.4
SLC6A12P48065 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC6A12P48065 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC6A12P48065 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 AK4P3-201ENST00000418260 669 ntBASIC17.52■□□□□ 0.4
SLC6A12P48065 AC104076.2-201ENST00000448912 469 ntBASIC17.52■□□□□ 0.4
SLC6A12P48065 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC6A12P48065 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC6A12P48065 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC6A12P48065 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A12P48065 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A12P48065 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A12P48065 AC006116.8-202ENST00000587620 1550 ntBASIC17.52■□□□□ 0.39
SLC6A12P48065 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A12P48065 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A12P48065 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SLC6A12P48065 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC6A12P48065 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC6A12P48065 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SLC6A12P48065 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC6A12P48065 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A12P48065 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC6A12P48065 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
SLC6A12P48065 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A12P48065 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SLC6A12P48065 RCN1P1-201ENST00000400413 996 ntBASIC17.51■□□□□ 0.39
SLC6A12P48065 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A12P48065 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A12P48065 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A12P48065 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A12P48065 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A12P48065 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC6A12P48065 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.51■□□□□ 0.39
SLC6A12P48065 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A12P48065 HYMAI.1-201ENST00000620949 238 ntBASIC17.51■□□□□ 0.39
SLC6A12P48065 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC6A12P48065 AC005332.8-201ENST00000622750 2735 ntBASIC17.51■□□□□ 0.39
SLC6A12P48065 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC6A12P48065 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC6A12P48065 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SLC6A12P48065 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC6A12P48065 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A12P48065 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 PCDHB18P-201ENST00000524813 2368 ntBASIC17.5■□□□□ 0.39
SLC6A12P48065 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 HBZP1-201ENST00000354915 429 ntBASIC17.5■□□□□ 0.39
SLC6A12P48065 FAM8A6P-201ENST00000407496 1135 ntBASIC17.5■□□□□ 0.39
SLC6A12P48065 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC6A12P48065 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC6A12P48065 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC6A12P48065 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC6A12P48065 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC6A12P48065 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC6A12P48065 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A12P48065 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A12P48065 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms