Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BRCC3P46736 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.27■□□□□ 0.67
BRCC3P46736 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRCC3P46736 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRCC3P46736 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
BRCC3P46736 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.27■□□□□ 0.67
BRCC3P46736 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BRCC3P46736 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.26■□□□□ 0.67
BRCC3P46736 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 AC073592.3-201ENST00000625118 1834 ntBASIC19.26■□□□□ 0.67
BRCC3P46736 AC018445.3-201ENST00000624177 1945 ntBASIC19.26■□□□□ 0.67
BRCC3P46736 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 MRPL3P1-201ENST00000400109 1033 ntBASIC19.26■□□□□ 0.67
BRCC3P46736 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.26■□□□□ 0.67
BRCC3P46736 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.26■□□□□ 0.67
BRCC3P46736 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.26■□□□□ 0.67
BRCC3P46736 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 AL138831.2-201ENST00000606564 490 ntBASIC19.26■□□□□ 0.67
BRCC3P46736 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.26■□□□□ 0.67
BRCC3P46736 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRCC3P46736 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.25■□□□□ 0.67
BRCC3P46736 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
BRCC3P46736 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.25■□□□□ 0.67
BRCC3P46736 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 AC093503.3-201ENST00000624917 2352 ntBASIC19.25■□□□□ 0.67
BRCC3P46736 WIZP1-201ENST00000531444 2299 ntBASIC19.25■□□□□ 0.67
BRCC3P46736 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
BRCC3P46736 PHGDH-209ENST00000641074 1780 ntBASIC19.25■□□□□ 0.67
BRCC3P46736 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.25■□□□□ 0.67
BRCC3P46736 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.25■□□□□ 0.67
BRCC3P46736 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.25■□□□□ 0.67
BRCC3P46736 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.25■□□□□ 0.67
BRCC3P46736 AC132008.2-207ENST00000454517 770 ntBASIC19.25■□□□□ 0.67
BRCC3P46736 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.25■□□□□ 0.67
BRCC3P46736 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.25■□□□□ 0.67
BRCC3P46736 AC112698.1-201ENST00000510299 916 ntBASIC19.25■□□□□ 0.67
BRCC3P46736 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.25■□□□□ 0.67
BRCC3P46736 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.25■□□□□ 0.67
BRCC3P46736 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRCC3P46736 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.25■□□□□ 0.67
BRCC3P46736 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.25■□□□□ 0.67
BRCC3P46736 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BRCC3P46736 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
BRCC3P46736 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 AC087289.5-201ENST00000586076 3175 ntBASIC19.25■□□□□ 0.67
BRCC3P46736 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BRCC3P46736 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.25■□□□□ 0.67
BRCC3P46736 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 AC125634.1-201ENST00000438758 1403 ntBASIC19.25■□□□□ 0.67
BRCC3P46736 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRCC3P46736 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BRCC3P46736 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
BRCC3P46736 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
BRCC3P46736 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BRCC3P46736 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.24■□□□□ 0.67
BRCC3P46736 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.24■□□□□ 0.67
BRCC3P46736 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
BRCC3P46736 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BRCC3P46736 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.24■□□□□ 0.67
BRCC3P46736 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.24■□□□□ 0.67
BRCC3P46736 SLC25A6P4-201ENST00000586535 553 ntBASIC19.24■□□□□ 0.67
BRCC3P46736 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.24■□□□□ 0.67
BRCC3P46736 TP73-AS1-207ENST00000624167 988 ntBASIC19.24■□□□□ 0.67
BRCC3P46736 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.24■□□□□ 0.67
BRCC3P46736 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRCC3P46736 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.24■□□□□ 0.67
BRCC3P46736 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
BRCC3P46736 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.24■□□□□ 0.67
BRCC3P46736 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
BRCC3P46736 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.24■□□□□ 0.67
BRCC3P46736 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms