Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.02■□□□□ 0.64
SLC1A1P43005 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC1A1P43005 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
SLC1A1P43005 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SLC1A1P43005 AC024243.1-201ENST00000609234 778 ntBASIC19.02■□□□□ 0.64
SLC1A1P43005 FAM87A-204ENST00000613235 858 ntBASIC19.02■□□□□ 0.64
SLC1A1P43005 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC1A1P43005 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SLC1A1P43005 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
SLC1A1P43005 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC1A1P43005 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SLC1A1P43005 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SLC1A1P43005 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC1A1P43005 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.02■□□□□ 0.63
SLC1A1P43005 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC1A1P43005 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC1A1P43005 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
SLC1A1P43005 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 HTR7P1-202ENST00000624664 4411 ntBASIC19.01■□□□□ 0.63
SLC1A1P43005 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC1A1P43005 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC1A1P43005 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SLC1A1P43005 AC012317.2-201ENST00000623305 2251 ntBASIC19.01■□□□□ 0.63
SLC1A1P43005 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SLC1A1P43005 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC1A1P43005 MIR3917-201ENST00000580971 93 ntBASIC19.01■□□□□ 0.63
SLC1A1P43005 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 AC092865.7-201ENST00000641832 219 ntBASIC19.01■□□□□ 0.63
SLC1A1P43005 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC1A1P43005 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SLC1A1P43005 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SLC1A1P43005 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC1A1P43005 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19■□□□□ 0.63
SLC1A1P43005 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SLC1A1P43005 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC1A1P43005 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SLC1A1P43005 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19■□□□□ 0.63
SLC1A1P43005 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SLC1A1P43005 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19■□□□□ 0.63
SLC1A1P43005 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 TSPY15P-201ENST00000457163 923 ntBASIC19■□□□□ 0.63
SLC1A1P43005 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19■□□□□ 0.63
SLC1A1P43005 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19■□□□□ 0.63
SLC1A1P43005 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19■□□□□ 0.63
SLC1A1P43005 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
SLC1A1P43005 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC1A1P43005 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SLC1A1P43005 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SLC1A1P43005 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
SLC1A1P43005 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC1A1P43005 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC1A1P43005 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
SLC1A1P43005 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC1A1P43005 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SLC1A1P43005 AP000523.1-201ENST00000398242 1049 ntBASIC18.99■□□□□ 0.63
SLC1A1P43005 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC1A1P43005 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC1A1P43005 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms