Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.63■□□□□ 0.41
HNF4AP41235 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 AL096828.2-201ENST00000567259 1965 ntBASIC17.63■□□□□ 0.41
HNF4AP41235 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.63■□□□□ 0.41
HNF4AP41235 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.63■□□□□ 0.41
HNF4AP41235 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.63■□□□□ 0.41
HNF4AP41235 BX664615.1-201ENST00000443558 458 ntBASIC17.63■□□□□ 0.41
HNF4AP41235 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.63■□□□□ 0.41
HNF4AP41235 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.63■□□□□ 0.41
HNF4AP41235 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.63■□□□□ 0.41
HNF4AP41235 GCSHP2-201ENST00000560971 527 ntBASIC17.63■□□□□ 0.41
HNF4AP41235 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.63■□□□□ 0.41
HNF4AP41235 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.63■□□□□ 0.41
HNF4AP41235 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 AC092865.7-201ENST00000641832 219 ntBASIC17.63■□□□□ 0.41
HNF4AP41235 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.63■□□□□ 0.41
HNF4AP41235 REXO1L9P-201ENST00000604264 2108 ntBASIC17.63■□□□□ 0.41
HNF4AP41235 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.63■□□□□ 0.41
HNF4AP41235 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HNF4AP41235 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HNF4AP41235 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HNF4AP41235 NOC2LP2-201ENST00000407594 1944 ntBASIC17.62■□□□□ 0.41
HNF4AP41235 FLJ13224-201ENST00000313737 1514 ntBASIC17.62■□□□□ 0.41
HNF4AP41235 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HNF4AP41235 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.62■□□□□ 0.41
HNF4AP41235 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.62■□□□□ 0.41
HNF4AP41235 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.62■□□□□ 0.41
HNF4AP41235 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.62■□□□□ 0.41
HNF4AP41235 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
HNF4AP41235 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
HNF4AP41235 AC011558.1-201ENST00000623459 338 ntBASIC17.62■□□□□ 0.41
HNF4AP41235 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HNF4AP41235 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.62■□□□□ 0.41
HNF4AP41235 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HNF4AP41235 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HNF4AP41235 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
HNF4AP41235 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.61■□□□□ 0.41
HNF4AP41235 TMPOP1-202ENST00000424642 1267 ntBASIC17.61■□□□□ 0.41
HNF4AP41235 AC117947.1-201ENST00000427448 529 ntBASIC17.61■□□□□ 0.41
HNF4AP41235 SLC25A6P5-201ENST00000435663 894 ntBASIC17.61■□□□□ 0.41
HNF4AP41235 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.61■□□□□ 0.41
HNF4AP41235 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 AL441883.1-201ENST00000566170 1045 ntBASIC17.61■□□□□ 0.41
HNF4AP41235 MIR3917-201ENST00000580971 93 ntBASIC17.61■□□□□ 0.41
HNF4AP41235 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HNF4AP41235 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.61■□□□□ 0.41
HNF4AP41235 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.61■□□□□ 0.41
HNF4AP41235 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.61■□□□□ 0.41
HNF4AP41235 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.61■□□□□ 0.41
HNF4AP41235 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HNF4AP41235 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HNF4AP41235 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HNF4AP41235 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HNF4AP41235 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms