Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFC5P40937 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20■□□□□ 0.79
RFC5P40937 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20■□□□□ 0.79
RFC5P40937 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC5P40937 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20■□□□□ 0.79
RFC5P40937 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC5P40937 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC5P40937 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFC5P40937 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RFC5P40937 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
RFC5P40937 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RFC5P40937 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 NSUN5P1-202ENST00000421140 1535 ntBASIC19.99■□□□□ 0.79
RFC5P40937 NSUN5P2-203ENST00000457352 1529 ntBASIC19.99■□□□□ 0.79
RFC5P40937 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RFC5P40937 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC5P40937 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.99■□□□□ 0.79
RFC5P40937 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.99■□□□□ 0.79
RFC5P40937 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 AC004408.2-201ENST00000623613 2777 ntBASIC19.99■□□□□ 0.79
RFC5P40937 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC5P40937 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC5P40937 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.99■□□□□ 0.79
RFC5P40937 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC5P40937 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC5P40937 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RFC5P40937 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RFC5P40937 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RFC5P40937 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC5P40937 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.98■□□□□ 0.79
RFC5P40937 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC5P40937 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RFC5P40937 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.98■□□□□ 0.79
RFC5P40937 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC5P40937 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC5P40937 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC5P40937 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC5P40937 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC5P40937 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.97■□□□□ 0.79
RFC5P40937 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC5P40937 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC5P40937 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC5P40937 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC5P40937 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.97■□□□□ 0.79
RFC5P40937 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC5P40937 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 AC099336.1-202ENST00000602961 463 ntBASIC19.97■□□□□ 0.79
RFC5P40937 AL121772.3-201ENST00000610840 674 ntBASIC19.97■□□□□ 0.79
RFC5P40937 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RFC5P40937 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC5P40937 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
RFC5P40937 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC5P40937 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
RFC5P40937 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFC5P40937 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFC5P40937 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RFC5P40937 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RFC5P40937 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.96■□□□□ 0.79
RFC5P40937 TSPY19P-201ENST00000418461 509 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms