Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.67■□□□□ 0.58
LTBRP36941 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.67■□□□□ 0.58
LTBRP36941 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LTBRP36941 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.67■□□□□ 0.58
LTBRP36941 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTBRP36941 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LTBRP36941 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTBRP36941 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LTBRP36941 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTBRP36941 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LTBRP36941 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTBRP36941 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LTBRP36941 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LTBRP36941 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.66■□□□□ 0.58
LTBRP36941 TSEN15P1-201ENST00000423257 515 ntBASIC18.66■□□□□ 0.58
LTBRP36941 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.66■□□□□ 0.58
LTBRP36941 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.66■□□□□ 0.58
LTBRP36941 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.66■□□□□ 0.58
LTBRP36941 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LTBRP36941 MIR4751-201ENST00000578027 74 ntBASIC18.66■□□□□ 0.58
LTBRP36941 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.66■□□□□ 0.58
LTBRP36941 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.66■□□□□ 0.58
LTBRP36941 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.66■□□□□ 0.58
LTBRP36941 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTBRP36941 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTBRP36941 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LTBRP36941 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LTBRP36941 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.65■□□□□ 0.58
LTBRP36941 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTBRP36941 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LTBRP36941 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.65■□□□□ 0.58
LTBRP36941 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTBRP36941 AC010460.3-201ENST00000511359 1579 ntBASIC18.65■□□□□ 0.58
LTBRP36941 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.65■□□□□ 0.58
LTBRP36941 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LTBRP36941 PRSS29P-201ENST00000440800 595 ntBASIC18.65■□□□□ 0.58
LTBRP36941 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.65■□□□□ 0.58
LTBRP36941 AC122714.2-201ENST00000502787 707 ntBASIC18.65■□□□□ 0.58
LTBRP36941 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LTBRP36941 IGHV3-65-201ENST00000523210 341 ntBASIC18.65■□□□□ 0.58
LTBRP36941 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LTBRP36941 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.65■□□□□ 0.58
LTBRP36941 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.65■□□□□ 0.58
LTBRP36941 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.65■□□□□ 0.58
LTBRP36941 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LTBRP36941 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTBRP36941 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LTBRP36941 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTBRP36941 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LTBRP36941 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.65■□□□□ 0.58
LTBRP36941 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.65■□□□□ 0.58
LTBRP36941 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
LTBRP36941 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.65■□□□□ 0.58
LTBRP36941 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTBRP36941 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.64■□□□□ 0.58
LTBRP36941 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LTBRP36941 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
LTBRP36941 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.64■□□□□ 0.57
LTBRP36941 AL032819.2-201ENST00000624543 2162 ntBASIC18.64■□□□□ 0.57
LTBRP36941 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.64■□□□□ 0.57
LTBRP36941 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.64■□□□□ 0.57
LTBRP36941 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.64■□□□□ 0.57
LTBRP36941 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.64■□□□□ 0.57
LTBRP36941 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.64■□□□□ 0.57
LTBRP36941 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.64■□□□□ 0.57
LTBRP36941 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LTBRP36941 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.64■□□□□ 0.57
LTBRP36941 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.64■□□□□ 0.57
LTBRP36941 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.64■□□□□ 0.57
LTBRP36941 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.64■□□□□ 0.57
LTBRP36941 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.64■□□□□ 0.57
LTBRP36941 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LTBRP36941 AC004790.2-201ENST00000623588 572 ntBASIC18.64■□□□□ 0.57
LTBRP36941 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 AL158211.5-201ENST00000623583 2518 ntBASIC18.64■□□□□ 0.57
LTBRP36941 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LTBRP36941 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.64■□□□□ 0.57
LTBRP36941 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LTBRP36941 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTBRP36941 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.63■□□□□ 0.57
LTBRP36941 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTBRP36941 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LTBRP36941 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LTBRP36941 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LTBRP36941 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTBRP36941 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LTBRP36941 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.63■□□□□ 0.57
LTBRP36941 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms