Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLP35914 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 ARMC10P1-201ENST00000313754 855 ntBASIC18.07■□□□□ 0.48
HMGCLP35914 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLP35914 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCLP35914 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLP35914 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCLP35914 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLP35914 AC011498.5-201ENST00000592027 486 ntBASIC18.07■□□□□ 0.48
HMGCLP35914 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.07■□□□□ 0.48
HMGCLP35914 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCLP35914 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCLP35914 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HMGCLP35914 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLP35914 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCLP35914 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLP35914 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLP35914 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HMGCLP35914 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HMGCLP35914 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 AC026471.1-201ENST00000564629 3026 ntBASIC18.06■□□□□ 0.48
HMGCLP35914 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGCLP35914 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGCLP35914 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 PCED1CP-201ENST00000419887 785 ntBASIC18.06■□□□□ 0.48
HMGCLP35914 KRT18P65-201ENST00000439811 1286 ntBASIC18.06■□□□□ 0.48
HMGCLP35914 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGCLP35914 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGCLP35914 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HMGCLP35914 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.06■□□□□ 0.48
HMGCLP35914 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.06■□□□□ 0.48
HMGCLP35914 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGCLP35914 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HMGCLP35914 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HMGCLP35914 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGCLP35914 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGCLP35914 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGCLP35914 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLP35914 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
HMGCLP35914 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 AP000997.3-201ENST00000623333 2250 ntBASIC18.05■□□□□ 0.48
HMGCLP35914 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HMGCLP35914 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HMGCLP35914 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HMGCLP35914 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCLP35914 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLP35914 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.05■□□□□ 0.48
HMGCLP35914 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.05■□□□□ 0.48
HMGCLP35914 AC009154.2-201ENST00000621177 724 ntBASIC18.05■□□□□ 0.48
HMGCLP35914 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCLP35914 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.05■□□□□ 0.48
HMGCLP35914 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
HMGCLP35914 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLP35914 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCLP35914 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCLP35914 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLP35914 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms